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A graph is built when you ask for one. Ingesting files never commits you to a build. knowledge_graph.auto_build on the workspace chains a build after every ingestion. The graph is not a separate question tool. Once it is built, automatic search (both routes) and QA use it on their own. See Choose the right tool.

PATCH knowledge_graph

PATCH /v1/workspaces/{id} replaces the knowledge_graph block whole. Read the current block first and send exclusions back with auto_build changed — sending auto_build alone resets exclude_path_prefixes and exclude_categories to empty. See Workspaces.